Insertion junction: CLIP2.005265_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005265
Chromosome:chromosome 1
Location:4691162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032500 DNJ8,TPR2 Tetratricopeptide-repeat protein 2; (1 of 1) K09523 - DnaJ homolog subfamily C member 3 (DNAJC3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGCTCGACATGTAGAGGCGTGGTACATGTGTGCGGCAGCACCGAGC
Internal bar code:GACGGCTCACGTCACGGTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5064
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCGGTAGCGCGTATTGA
Suggested primer 2:CACACACCTGCACAAACTCG