Insertion junction: CLIP2.005265_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005265
Chromosome:chromosome 1
Location:4691163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032500 DNJ8,TPR2 Tetratricopeptide-repeat protein 2; (1 of 1) K09523 - DnaJ homolog subfamily C member 3 (DNAJC3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGCTCCCTGCTCCTCCGGTCTTGCTCCCCGCACAGACCTGCAATCCA
Internal bar code:CCTTACTCGAAGGCTCGTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2529
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACCTGCACAAACTCG
Suggested primer 2:GACTCGGTAGCGCGTATTGA