Insertion junction: CLIP2.005272_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005272
Chromosome:chromosome 17
Location:4082410
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g728800 IDH1 (1 of 1) PTHR11835:SF42 - ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT BETA, MITOCHONDRIAL; Isocitrate dehydrogenase, NAD-dependent 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGTATTTTTATAGATACTTACAGTATAACGAAGATGTTGTCGCGACT
Internal bar code:CCTTGATTGAACACATTCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:682
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTAGGGTTTGAGGGGG
Suggested primer 2:TACGAAGTTGGGGGAATGCC