Insertion junction: CLIP2.005277_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005277
Chromosome:chromosome 6
Location:2828169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271950 CGL135,GC6 (1 of 1) PTHR10013 - GENERAL VESICULAR TRANSPORT FACTOR P115; Conserved in the green lineage 135 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGCTTTGCTCGCTCTGCCCCACCGCCTTCTCGCAGTCCCACGCGTT
Internal bar code:TCCTGCATGTGGTGTGGATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:209
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTCTCACCTGCACCTTG
Suggested primer 2:TGCAAGTCCGCTTCTGACAT