Insertion junction: CLIP2.005278_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005278
Chromosome:chromosome 8
Location:3468304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378650 CGl131 (1 of 18) IPR011051 - RmlC-like cupin domain; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTGGGTGGTGCGTGTGGACGCTGGCTGCGGGGCCGGAGGACAGGGTT
Internal bar code:CCTTACGGAAGCTTTTCGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1844
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACGACCTTGACGGACACTC
Suggested primer 2:ATTCACCAACTCGGAGGCAG