Insertion junction: CLIP2.005278_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005278
Chromosome:chromosome 8
Location:3468304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378650 CGl131 (1 of 18) IPR011051 - RmlC-like cupin domain; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTCCCCTTGTCCAGCACGAGCTGCGCGTCCTCCTTATCGAACATCTT
Internal bar code:GGCATGTGTTCTCTCCCAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3083
LEAP-Seq percent confirming:88.6364
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCACCAACTCGGAGGCAG
Suggested primer 2:AACGACCTTGACGGACACTC