Insertion junction: CLIP2.005283_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005283
Chromosome:chromosome 1
Location:348616
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g002050 APT1 Acid phosphatase; (1 of 1) K01078 - acid phosphatase (E3.1.3.2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACCCCTCGCCACACTGTGAAGGGGCGGGGAGGGGGGCACGCTTGCGA
Internal bar code:AATATCAAACCAGTCTAGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:240
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCCCACCTTTCCATCC
Suggested primer 2:TACCACTACCGTTCGTGCAC