Insertion junction: CLIP2.005288_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005288
Chromosome:chromosome 9
Location:6650211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416500 CGL151 Conserved in the Green Lineage; (1 of 2) IPR026939 - At2g23090-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAAACTGCGACGGGTACGTCCACTCTTTCTGCGCTCACAGGTTCCAGT
Internal bar code:GACTGACTGGTCCGAAGCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5137
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTCCTCATGAGACGCTC
Suggested primer 2:GTTTATCGCCCGTTTCACCG