Insertion junction: CLIP2.005289_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005289
Chromosome:chromosome 12
Location:4174869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517700 NYC1,SDR21 (1 of 2) K13606 - chlorophyll(ide) b reductase (NOL, NYC1); Chlorophyll b reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATAGTCGCGTAAAGCTCAGTAGTGCTCAGATGCGAATGCAGATGCGCG
Internal bar code:AGGCGACACGTCGACTGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3830
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGTTGAAGGCCTGAGC
Suggested primer 2:ACTACGCGGCATACGGTAAG