Insertion junction: CLIP2.005289_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005289
Chromosome:chromosome 12
Location:4174870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517700 NYC1,SDR21 (1 of 2) K13606 - chlorophyll(ide) b reductase (NOL, NYC1); Chlorophyll b reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCATAACATAGCTTTACACTACTACCAGACCTCTCGGGCAACCCATCT
Internal bar code:AGGCGACACGTCGACTGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1513
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACGCGGCATACGGTAAG
Suggested primer 2:AGGATGTTGAAGGCCTGAGC