Insertion junction: CLIP2.005291_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005291
Chromosome:chromosome 13
Location:129591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562750 CGLD38 Conserved in the Green Lineage and Diatoms; (1 of 1) PF14234 - Domain of unknown function (DUF4336) (DUF4336) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGCGCGGCCGCCTGCTGCCGCCGCTCCGCGGCCGTCAGCTTGGCA
Internal bar code:ACCGAGACTCGTCGGCATTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1298
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTGACACGCTTGCATCT
Suggested primer 2:CTTCTCCCGTGTGTCACCTC