Insertion junction: CLIP2.005294_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005294
Chromosome:chromosome 12
Location:7396419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557450 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCGCACCTGCTTGCGTAACGGCGTCGACGCTGGGTAACAGGGGCCTC
Internal bar code:ACTCTTTCAGATATAGGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:547
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATGTGGAGGTTGAGGAG
Suggested primer 2:CAGCCTGCTCACCAGAATCA