Insertion junction: CLIP2.005303_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005303
Chromosome:chromosome 16
Location:5409487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682900 CLPR2 (1 of 1) PTHR10381//PTHR10381:SF15 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC; inactive subunit of chloroplast ClpP complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCGGGTGGTGCAAGGGGGAGGAACGAGGGGAGCCACTGCGATTGGGG
Internal bar code:GCTGTATTACTGTATATGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGACCCTATGAGCCGAG
Suggested primer 2:CTTCTTGCCCACCACGTTTG