Insertion junction: CLIP2.005309_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005309
Chromosome:chromosome 17
Location:2808201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718250 DRR1 (1 of 1) PTHR10491 - DTDP-4-DEHYDRORHAMNOSE REDUCTASE; dTDP-4-dehydrorhamnose reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCGGGGCCAGTGTAACGCGGATGGCTAAACCCGCCTGGGCCGCCTGG
Internal bar code:GTATGCTGGTGGGCGGCTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3874
LEAP-Seq percent confirming:25.641
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGTACAGCAACAGCAGG
Suggested primer 2:CAGGATGTCCCGAATGGCTT