Insertion junction: CLIP2.005314_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005314
Chromosome:chromosome 1
Location:397966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g002350 NAE1 RUB1/NEDD8 E1 activating enzyme; (1 of 1) K04532 - amyloid beta precursor protein binding protein 1 (APPBP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGTTGATCTCGTGCCGGAGTGGTCTAACGGGTGGGTCTCAAGGACT
Internal bar code:AAATTTCTTATAGTGCGATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CATATGCCACGCAGGTTTCG
Suggested primer 2:GTATGGAGGTGGTGTGGGTG