Insertion junction: CLIP2.005318_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005318
Chromosome:chromosome 17
Location:2880257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718900 FAP88 Flagellar Associated Protein 88; (1 of 1) PTHR23237//PTHR23237:SF6 - NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 // H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAAACCACAGGGGTGGGGGTGGGCGCATGGCCACACCAGGGTGCCAG
Internal bar code:TATAGTCATTCTTTGATAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1306
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTCTGAGAGCCTCGACC
Suggested primer 2:TCTCTGCAGGCTTGTGTACG