Insertion junction: CLIP2.005321_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005321
Chromosome:chromosome 3
Location:589710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145387 FAP239 Coiled-Coil Flagellar Associated Protein 239 5'UTR
Cre03.g145407 (1 of 2) IPR000571//IPR002110//IPR020683 - Zinc finger, CCCH-type // Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCTCGTTTAGAATGGAGTCGTCGGGAGTGCCTCCCGGGAACGGGGCT
Internal bar code:ATGTCAGAATCCTCTATGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1363
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGACCTGCTCTGAACAAC
Suggested primer 2:CGTCCCTCGTATGTGAGCTC