Insertion junction: CLIP2.005325_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005325
Chromosome:chromosome 17
Location:4597228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTCGCTGTCAATCTTTCTACACCTGGCTCTCGCCGTCGCAGCTCCCT
Internal bar code:TTCCTCTCGCTCGAGATACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2342
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGGTTACAGGATGGTT
Suggested primer 2:GTACCCTGCCATGCTGTCTT