Insertion junction: CLIP2.005330_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005330
Chromosome:chromosome 17
Location:3333472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722700 (1 of 2) PF04893 - Yip1 domain (Yip1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGGTCTTAGCGCTCGCCCTCTTACACCGTCCTAAGTGGTTCGCCTGT
Internal bar code:GGGGGGAGTATGGCCTGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1787
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTGAGGGCTGTCATGG
Suggested primer 2:GGAGATGGCATAACCGGGAG