Insertion junction: CLIP2.005331_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005331
Chromosome:chromosome 9
Location:1751349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398250 3'UTR
Cre09.g398300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCGGTAGACCAGGGGCTTGAGTTCTTGGATCCTGTGCGCCGTAGAAT
Internal bar code:GCGTTCCGACCGTTTATATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2083
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCTTTGAGATGCATGCG
Suggested primer 2:TGCCATGTCATACCCACACC