Insertion junction: CLIP2.005332_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005332
Chromosome:chromosome 15
Location:295850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635100 (1 of 2) IPR000104//IPR010402 - Antifreeze protein, type I // CCT domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCTCCCGCGCCGCCTGGCAACCTCAAACAGGTGCCTACATCTTTGAA
Internal bar code:ACCATAAGCATAGTATATAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGCTGGATGCAAGGTTA
Suggested primer 2:AACGACGCTTTTTGGGCTTC