Insertion junction: CLIP2.005341_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005341
Chromosome:chromosome 1
Location:6696792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047800 GRX6 Glutaredoxin 6, CGFS type, chloroplastic; (1 of 1) PTHR10293:SF45 - MONOTHIOL GLUTAREDOXIN-S16, CHLOROPLASTIC 3'UTR
Cre01.g047850 (1 of 1) 4.2.1.145 - Capreomycidine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAATACAGTGACAGTTGTTGTGGCTGGTTCCGTAGGACCGCACGCAATG
Internal bar code:TATTTACTCCAGGGGGTGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1342
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCTTTACATCAGCGGC
Suggested primer 2:GACTCCACAGCTAGAGGGGA