Insertion junction: CLIP2.005358_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005358
Chromosome:chromosome 10
Location:1363315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427800 (1 of 3) IPR002889//IPR013994 - Carbohydrate-binding WSC // Carbohydrate-binding WSC, subgroup CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGCCCCGCGGATGCACCGCTGTGGGCGGGCCTGTCAATAGGCATGGG
Internal bar code:AGCAACATCGAAGTGTTCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACTTCCAGGCGCACTCA
Suggested primer 2:GATATTCGACTCGGGCACGT