Insertion junction: CLIP2.005363_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005363
Chromosome:chromosome 4
Location:1608975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213100 CGLD7 conserved, expressed esterase / lipase / thioesterase family protein; (1 of 1) 3.1.1.2 - Arylesterase / Paraoxonase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGGTCACCTGCTAACCAGAACACATGTGGACATCCTTTTCTTTCAA
Internal bar code:ATAGCGGCTTATTAGTTTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:101
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGTTGCAAAGGGTTCCT
Suggested primer 2:TCCTGTCGTTGAAGCTCACC