Insertion junction: CLIP2.005363_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005363
Chromosome:chromosome 6
Location:8615005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800756 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCAAGCAAGCGGCATAACAGCGGGGAAAATGAGTGCAAGTTTGAGA
Internal bar code:TTATAGAAGAGTGTGTGTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3936
LEAP-Seq percent confirming:69.5652
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGATGGTGGAGCCTTC
Suggested primer 2:GAAGGCTCCTCCCTGCAATT