Insertion junction: CLIP2.005364_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005364
Chromosome:chromosome 6
Location:3249657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277100 (1 of 4) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCCACCACCCAGCCAGGGGGAGAGGGCCTGGCTACCACACGGGCGG
Internal bar code:AATAGTTGGGTGTAATCTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3217
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGATGTGGATGTGCTCAA
Suggested primer 2:GTGGGAGGTGTGTGTGAGAG