Insertion junction: CLIP2.005366_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005366
Chromosome:chromosome 12
Location:7225701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g559000 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGGTATGCATGCTGTTGAGGCTGCAGTTGTGCCCACTCTCCTGCGTT
Internal bar code:AAGTCCCTCTCTTGAGCAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAGTCGCGGATGTACAC
Suggested primer 2:AATGAACCAAACCAACCGCG