Insertion junction: CLIP2.005366_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005366
Chromosome:chromosome 12
Location:7225706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g559000 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTGTTCTTCCACCCTACAAGCAAGCCAACACCCCTGTGAGCAATTAC
Internal bar code:AAGTCCCTCTCTTGAGCAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3298
LEAP-Seq percent confirming:89.0411
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:AATGAACCAAACCAACCGCG
Suggested primer 2:TAGCAGTCGCGGATGTACAC