Insertion junction: CLIP2.005368_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005368
Chromosome:chromosome 12
Location:2281256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508300 CGL144 Conserved in the Green Lineage; (1 of 3) PF04359 - Protein of unknown function (DUF493) (DUF493) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGACAGTTACACGGGGGTAAGCAGAGTTAATGATAACGTAGGCCCTTC
Internal bar code:TACTATATCGGCATTAAAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5442
LEAP-Seq percent confirming:98.4615
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCGCGCTTCACAGTAAG
Suggested primer 2:CGCACGCATGATTGGTGTAG