Insertion junction: CLIP2.005374_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005374
Chromosome:chromosome 4
Location:3675235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228900 PPP19 (1 of 1) K17618 - ubiquitin-like domain-containing CTD phosphatase 1 [EC:3.1.3.16] (UBLCP1); Phosphoprotein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACACGCTTTCGCCTGCAGAATGATTTCGACATTGGTGCGGACGAGCA
Internal bar code:TAGGTTTTCGGATGCGATAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:266
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGGCATGGAGTATACCG
Suggested primer 2:CCCTCCAAACCCAATCTCCC