Insertion junction: CLIP2.005375_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005375
Chromosome:chromosome 12
Location:8808374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546850 (1 of 4) PTHR11266//PTHR11266:SF42 - PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 // SUBFAMILY NOT NAMED; Putative peroxisomal membrane protein 5'UTR
Cre12.g801483 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGCGGGCACGCCGTCCGGCCCCGCGGACGGCAGAAAGCCTGCCTTT
Internal bar code:TCCGGGACGTTTGCTATACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2553
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAAAGAGACAGGGACC
Suggested primer 2:GCCGCAGCTGTAAATTACCG