Insertion junction: CLIP2.005378_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005378
Chromosome:chromosome 3
Location:1047874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148250 CGL58 (1 of 1) PTHR15856//PTHR15856:SF25 - PHD FINGER PROTEIN 20-RELATED // SUBFAMILY NOT NAMED; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACCTTGAGGTCTGTCAGCTCCTCCGGTGTCACCTCCTTGGGCAGGTC
Internal bar code:AAGATGAACCGAAAGGAAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:796
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAGTTAACTGCCGGTGG
Suggested primer 2:GTACCGGGAGCGGTAGATTG