Insertion junction: CLIP2.005381_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005381
Chromosome:chromosome 10
Location:1975846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432100 (1 of 1) PTHR34687//PTHR34687:SF1 - FAMILY NOT NAMED // CHAPERONE PROTEIN DNAJ-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCGTGCGGACAGGGCGAGCTCGTGTGGCCCGCGTCCAGGCGTTCGTG
Internal bar code:TGCAATTAGGATAATTTGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5163
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGTGCCACGTAAATCAA
Suggested primer 2:CAGTAGCTACCGTACGCCAG