Insertion junction: CLIP2.005391_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005391
Chromosome:chromosome 1
Location:878845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g005001 CPLD9 Conserved in the Plant Lineage and Diatoms 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCACAAGACTTGGGCACACATGTCCAACACTCAATCAACGCCGCGTC
Internal bar code:GCCAGATTCTATCGGCGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3963
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:168
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:168

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTTTTTGGCAGGTGAGG
Suggested primer 2:GAATCTCCTAGCACTCCCGC