Insertion junction: CLIP2.005393_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005393
Chromosome:chromosome 16
Location:5712285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680800 CGL155 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTGGTAGCCTGTAAGCTCTGACAGGGGGTATGGGTCGTGTCACTAG
Internal bar code:TCAACCTATAAAGTCGTGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5233
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGGTTGTGTAAGGACGA
Suggested primer 2:ATGATTGTCACCTCGCAGCA