Insertion junction: CLIP2.005393_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005393
Chromosome:chromosome 16
Location:5712295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680800 CGL155 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATACACCTAAAACTTACATCGTCTCGCCCGACTGCTCGCCCAGGACG
Internal bar code:TAAATGGCGGCCCGTCCTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4852
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATTGTCACCTCGCAGCA
Suggested primer 2:GCAGGGTTGTGTAAGGACGA