Insertion junction: CLIP2.005394_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005394
Chromosome:chromosome 12
Location:4170642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517681 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGAGGCAGCAGCGGGCCAGGGGAACCTCCAGCAACTAAGTCAACTTC
Internal bar code:ATATTAGTGATAGTTTTGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3386
LEAP-Seq percent confirming:78.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCCTTTCCAGATGTGT
Suggested primer 2:ACCCATCACATCAACGGACC