Insertion junction: CLIP2.005397_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005397
Chromosome:chromosome 2
Location:2469447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g091750 (1 of 4) 2.7.9.5 - Phosphoglucan, water dikinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACCCTTCTTGTAAACAGCTCTCCAGGGCACAGCCTGAACATGCACT
Internal bar code:AAGTCACCCCGGGGTTAATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5797
LEAP-Seq percent confirming:94.6667
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGGCACGATGTTCGACA
Suggested primer 2:CCGACTTCGTGACAGTGACA