Insertion junction: CLIP2.005399_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005399
Chromosome:chromosome 4
Location:1412623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214250 AGO2 Argonaute-like protein; (1 of 3) PTHR22891:SF0 - PROTEIN ARGONAUTE-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCCAGTGCGTGCCTGAAAGCCGCCACAGCAGTGTGCCAGACCGGAC
Internal bar code:TTTTGTGCTGAATCCGGTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAACCTACCGCTCCCCCT
Suggested primer 2:GATACGGCAGGGTACGACAG