Insertion junction: CLIP2.005399_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005399
Chromosome:chromosome 4
Location:1412626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214250 AGO2 Argonaute-like protein; (1 of 3) PTHR22891:SF0 - PROTEIN ARGONAUTE-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACGGTGACGTCGGCGCCTCCAAGATTGCATGTTGTCAACGCCTTTTT
Internal bar code:AGGATCAGTGTGCGATCTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GATACGGCAGGGTACGACAG
Suggested primer 2:ATAAACCTACCGCTCCCCCT