Insertion junction: CLIP2.005401_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005401
Chromosome:chromosome 13
Location:1323619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGGCAGGTGGTGGAAGGCGATACCGTTACTTGCTGCTGGCAAGGAAG
Internal bar code:ATAGGTACGACTTCTTAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3417
LEAP-Seq percent confirming:72.619
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGGACCCATGACAGCAC
Suggested primer 2:GCATAATTTGCGCGGGTGAT