Insertion junction: CLIP2.005402_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005402
Chromosome:chromosome 6
Location:2025487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265550 CDPK12 (1 of 1) PF07714//PF13202 - Protein tyrosine kinase (Pkinase_Tyr) // EF hand (EF-hand_5); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCACTCAGGCTCTAAGCTCTTGGTATTATGACGACAGCCACCACACA
Internal bar code:TATTTCATTTTTTTTGAATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3556
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCAGGCTACATCCTAGT
Suggested primer 2:TACGTTCGGCTCCAGTCCTA