Insertion junction: CLIP2.005405_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005405
Chromosome:chromosome 13
Location:1279909
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570851 PSB34 PSII assembly protein; (1 of 1) PTHR35753//PTHR35753:SF1 - FAMILY NOT NAMED // PROLINE-RICH FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAACGCCCTGGCGGTGAGTGGTGCCGGTGCCGGTGCCGGGTAGAGTCG
Internal bar code:AGAGGTGTTAAAATTTATAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3024
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACACTAGTTGCCACAGG
Suggested primer 2:CACCATGTTGAGCATAGCGC