Insertion junction: CLIP2.005413_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005413
Chromosome:chromosome 1
Location:5310636
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g037350 TEH2,CGLD2 Thioesterase family protein; (1 of 2) K17361 - acyl-coenzyme A thioesterase 9 [EC:3.1.2.-] (ACOT9) 5'UTR
Cre01.g037400 CYN3,CYN19A,CYN19-1 (1 of 2) K12868 - pre-mRNA-splicing factor SYF2 (SYF2); Cyclophilin 19-1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGGCTTGTCTACAACTTGCTGAGCAGGCTGCAAGGAATTTGTTTTAC
Internal bar code:GAGGAAGTGTACGATCAGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTGGGTTCGTTTGGAC
Suggested primer 2:AACCAAGTCTTCCGCTCCTG