Insertion junction: CLIP2.005415_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005415
Chromosome:chromosome 2
Location:3471605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098950 SYP72 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATCTACGCGGTGCCGGACGGCATGAGCATGGCGGGGGCCCGCAGGCC
Internal bar code:CAACTGACATTGTGGCATTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2557
LEAP-Seq percent confirming:65.8824
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCACGTTTGGAACAGAAC
Suggested primer 2:GCTCTGCCCCTGACAAATCT