Insertion junction: CLIP2.005416_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005416
Chromosome:chromosome 3
Location:2615881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160400 SAC1 (1 of 1) IPR001898//IPR004680//IPR006037//IPR029062 - Sodium/sulphate symporter // Citrate transporter-like domain // Regulator of K+ conductance, C-terminal // Class I glutamine amidotransferase-like; Sulfur acclimation 1 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACCAGGGATGTGGGTCAGGGTTTGGGGAGGTTTGCAGCTGGTGGGAT
Internal bar code:TGTTCACGTAGGTGACCTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2730
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGCACCGAGTCACAGGA
Suggested primer 2:GCACCACAAACGGTTACCAC