Insertion junction: CLIP2.005418_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005418
Chromosome:chromosome 8
Location:3124943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375950 EXR1 (1 of 1) PF13474 - SnoaL-like domain (SnoaL_3); UvrB containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTTAGCGAGTAGCGCGCGAGGAGGGCGCTGACAAAGAGCATGCATC
Internal bar code:ACCCCGTGCTCCACCTGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1390
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGCGACGCAATTCAGTG
Suggested primer 2:ACCACTCAAGCCCCAAAACA