Insertion junction: CLIP2.005425_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005425
Chromosome:chromosome 5
Location:2178716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237350 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTATCGGCGTTGTAGTCCGTGACCACTGCGGTGTACCACTGTTTCTCA
Internal bar code:TAGGGGGCAGTTTGAGGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6017
LEAP-Seq percent confirming:87.037
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTATCCAACTTGCAGGGG
Suggested primer 2:CCCAAACCAACAGCGTTCTG