Insertion junction: CLIP2.005426_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005426
Chromosome:chromosome 2
Location:299990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074950 (1 of 5) PTHR10351//PTHR10351:SF42 - TRANSCRIPTION FACTOR BTF3 // LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGGACCTGGAGGGCATTCAGATCTTGACAGCAAGAACGCGCCTTGGT
Internal bar code:ATAGCAAAATTGATAGTGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3522
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAGACGACTTCGCATCT
Suggested primer 2:ATCTGCAGGTGCTCGATCAG