Insertion junction: CLIP2.005434_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005434
Chromosome:chromosome 12
Location:7842008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g553750 SPL26 Pre-mRNA splicing factor; (1 of 2) K13095 - splicing factor 1 (SF1) 3'UTR
Cre12.g553800 (1 of 1) IPR002110//IPR020683//IPR029071 - Ankyrin repeat // Ankyrin repeat-containing domain // Ubiquitin-related domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGTGACGGCGCCGCAGCAGCGGCGGCTGGCGGCAGCGGTGTGTCTG
Internal bar code:AACACGCGCTGAATAGCATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1255
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTGGATGACCTGTTCGG
Suggested primer 2:TCGCTGTTTGACGACGACG